<%@ taglib uri="/WEB-INF/struts-logic.tld" prefix="logic" %> <%@ taglib uri="/WEB-INF/tairtags.tld" prefix="tair" %> <%@ taglib uri="/WEB-INF/input.tld" prefix="input"%> <%@ page import="java.util.*" %> <%@ page import="pub.beans.* , pub.utils.StringUtils" %> <%-- Note: this page is tied to the DisplayAnnotation.jsp page, and we expect certain things in the request object as a result of doing a DisplayAnnotation. In particular, the javascript function evidenceDescriptionCallbackHelper() comes from DisplayAnnotation.jsp. --%> <% pub.beans.TermBean term_bean = (pub.beans.TermBean) request.getAttribute("term_bean"); %> <%@ page import="pub.beans.*, pub.servlets.*, pub.db.*" %> <% Map relationShips = (Map) request.getAttribute("relationShips"); String annotationStatus = (String) request.getAttribute("vectorType"); String type = (String) request.getAttribute("type"); %> <% String relationship = "updateAnnotation_"+annotationId+"_"+"relation"; String sourceTableId = "updateAnnotation_"+annotationId+"_sourceTableId"; String sourceTable = "updateAnnotation_"+annotationId+"_sourceTable"; String evidenceType = "updateAnnotation_"+annotationId+"_"+"evidenceType"; String evidenceDesc = "updateAnnotation_"+annotationId+"_"+"evidenceDesc"; String evidenceWith = "updateAnnotation_"+annotationId+"_"+"evidenceWith"; String isTemp = "updateAnnotation_"+annotationId+"_"+"isTemp"; String isObsolete= "updateAnnotation_"+annotationId+"_"+"isObsolete"; String replacedBy = "updateAnnotation_"+annotationId+"_"+"replacedBy"; %> > > <% if (annotation.getObjectTermBean().getType().equalsIgnoreCase("gene") ){ %> > <% } %>

Relationship	<% String relation=annotation.getRelationshipTypeId(); if (relation.equals("0")){ relation=""; } %>		<%= annotation.getTermName() %> <% if ( ! StringUtils.isEmpty( annotation.getObjectTermBean().getExternalId() )){ %> (<%= annotation.getObjectTermBean().getExternalId() %>) <% }else { %>   <% } %> Replace Term (term/go id )
<%= annotation.getObjectTermBean().getGene_summary() %>

>

Evidence:	Evidence Type	<% for (int i=0; i <%= EvidenceTypeList.getEvidence_code(i) %> <% } %>	Description

> <% if (type.equalsIgnoreCase("active") ) { %> <% } else{ %> <% } %>

Evidence With

Reference <% if( pub_ref.isEmpty().equals("y")){ %> No Reference <% }else{ %> <%= pub_ref.getTableName() %><%-- --%>: <% } %>

Annotated by/ date <%= user.getName() %> / <%= annotation.getDateAnnotated() %>

Updated by/ date <%= updated_by.getName() %> / <%= annotation.getDateUpdated() %>

Obsolete? Y N

Temporary? Y N

Obsoleted by/ date <%= thisuser.getName() %> / <%= annotation.getDateUpdated() %>

Obsolete? Y N

<%-- testing --- perhaps we should make a separate page for editing annotations? (test environment) [edit] --%> <%-- Show a list of comments --%> > Comments Add Comment >

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